IL_9RU9_035

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9RU9|1|L5|G|748, 9RU9|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|L5|G|745
9RU9|1|L5|A|746
9RU9|1|L5|A|747
9RU9|1|L5|G|748
9RU9|1|L5|G|749
9RU9|1|L5|U|750
9RU9|1|L5|G|751
9RU9|1|L5|G|752
*
9RU9|1|L5|U|911
9RU9|1|L5|G|912
9RU9|1|L5|U|913
9RU9|1|L5|U|914
9RU9|1|L5|A|915
9RU9|1|L5|C|916
9RU9|1|L5|A|917
9RU9|1|L5|G|918
9RU9|1|L5|C|919

Current chains

Chain L5

23S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a