IL_9RVC_071
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGAG*CUUUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 9RVC|1|a|U|100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RVC_071 not in the Motif Atlas
- Geometric match to IL_4WF9_004
- Geometric discrepancy: 0.1169
- The information below is about IL_4WF9_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9RVC|1|a|G|81
9RVC|1|a|G|82
9RVC|1|a|G|83
9RVC|1|a|A|84
9RVC|1|a|G|85
*
9RVC|1|a|C|97
9RVC|1|a|U|98
9RVC|1|a|U|99
9RVC|1|a|U|100
9RVC|1|a|G|101
9RVC|1|a|A|102
9RVC|1|a|U|103
9RVC|1|a|C|104
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain t
- Large ribosomal subunit protein uL24
- Chain x
- Large ribosomal subunit protein uL29
Coloring options: