IL_9RVC_075
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUAGUAG*CGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RVC_075 not in the Motif Atlas
- Homologous match to IL_7A0S_007
- Geometric discrepancy: 0.1063
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9RVC|1|a|C|241
9RVC|1|a|U|242
9RVC|1|a|U|243
9RVC|1|a|A|244
9RVC|1|a|G|245
9RVC|1|a|U|246
9RVC|1|a|A|247
9RVC|1|a|G|248
*
9RVC|1|a|C|256
9RVC|1|a|G|257
9RVC|1|a|A|258
9RVC|1|a|A|259
9RVC|1|a|A|260
9RVC|1|a|U|261
9RVC|1|a|G|262
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain k
- Large ribosomal subunit protein uL15
Coloring options: