IL_9RVC_093
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAUG*UUAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RVC_093 not in the Motif Atlas
- Geometric match to IL_4WF9_029
- Geometric discrepancy: 0.1371
- The information below is about IL_4WF9_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01742.1
- Basepair signature
- cWW-L-cWW-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9RVC|1|a|U|889
9RVC|1|a|G|890
9RVC|1|a|A|891
9RVC|1|a|U|892
9RVC|1|a|G|893
*
9RVC|1|a|U|975
9RVC|1|a|U|976
9RVC|1|a|A|977
9RVC|1|a|A|978
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain y
- Large ribosomal subunit protein uL30
Coloring options: