IL_9RVC_105
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 9RVC|1|a|A|1187
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9RVC_105 not in the Motif Atlas
- Homologous match to IL_7A0S_036
- Geometric discrepancy: 0.3103
- The information below is about IL_7A0S_036
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
9RVC|1|a|U|1062
9RVC|1|a|U|1063
9RVC|1|a|A|1064
9RVC|1|a|A|1065
9RVC|1|a|G|1066
9RVC|1|a|U|1067
9RVC|1|a|G|1068
*
9RVC|1|a|C|1184
9RVC|1|a|U|1185
9RVC|1|a|A|1186
9RVC|1|a|A|1187
9RVC|1|a|A|1188
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36
- Chain J
- Large ribosomal subunit protein uL13
Coloring options: