IL_9SUM_037
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GAGGUAA*UAAAUAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94128.4
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9SUM|1|A|G|938
9SUM|1|A|A|939
9SUM|1|A|G|940
9SUM|1|A|G|941
9SUM|1|A|U|942
9SUM|1|A|A|943
9SUM|1|A|A|944
*
9SUM|1|A|U|999
9SUM|1|A|A|1000
9SUM|1|A|A|1001
9SUM|1|A|A|1002
9SUM|1|A|U|1003
9SUM|1|A|A|1004
9SUM|1|A|U|1005
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain I
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L10
- Chain V
- 60S ribosomal protein L21-A
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