IL_9SUM_047
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 14
Unit IDs
9SUM|1|A|U|1120
9SUM|1|A|G|1121
9SUM|1|A|C|1122
9SUM|1|A|C|1123
9SUM|1|A|G|1124
9SUM|1|A|G|1125
9SUM|1|A|A|1126
9SUM|1|A|A|1127
*
9SUM|1|A|U|1272
9SUM|1|A|A|1273
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein L7
- Chain Q
- 60S ribosomal protein L16-B
- Chain U
- 60S ribosomal protein L20-A
- Chain h
- 60S ribosomal protein L33-A
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