IL_9SUM_049
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|U|1138, 9SUM|1|A|C|1139, 9SUM|1|A|C|1263, 9SUM|1|A|A|1265
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39054.4
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
9SUM|1|A|C|1134
9SUM|1|A|U|1135
9SUM|1|A|C|1136
9SUM|1|A|A|1137
9SUM|1|A|U|1138
9SUM|1|A|C|1139
9SUM|1|A|A|1140
9SUM|1|A|G|1141
*
9SUM|1|A|C|1261
9SUM|1|A|U|1262
9SUM|1|A|C|1263
9SUM|1|A|A|1264
9SUM|1|A|A|1265
9SUM|1|A|G|1266
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L9-B
- Chain O
- Large ribosomal subunit protein eL14 domain-containing protein
- Chain Q
- 60S ribosomal protein L16-B
- Chain U
- 60S ribosomal protein L20-A
- Chain o
- Large ribosomal subunit protein eL40
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