IL_9SUM_067
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|U|1656, 9SUM|1|A|A|1669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93476.4
- Basepair signature
- cWW-tSH-L-R-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
9SUM|1|A|U|1651
9SUM|1|A|G|1652
9SUM|1|A|G|1653
9SUM|1|A|A|1654
9SUM|1|A|A|1655
9SUM|1|A|U|1656
9SUM|1|A|U|1657
*
9SUM|1|A|G|1667
9SUM|1|A|G|1668
9SUM|1|A|A|1669
9SUM|1|A|G|1670
9SUM|1|A|A|1671
9SUM|1|A|U|1672
9SUM|1|A|G|1673
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain T
- Ribosomal protein L19
- Chain ZE
- 40S ribosomal protein S13
- Chain b
- 60S ribosomal protein L27
- Chain e
- 60S ribosomal protein L30
- Chain r
- 60S ribosomal protein L43
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