IL_9SYH_169

3D structure

PDB id

9SYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from deltaRlmE strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.89 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

9SYH|1|a|U|2689, 9SYH|1|a|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYH|1|a|U|2687
9SYH|1|a|G|2688
9SYH|1|a|U|2689
9SYH|1|a|U|2690
9SYH|1|a|C|2691
*
9SYH|1|a|G|2718
9SYH|1|a|G|2719
9SYH|1|a|U|2720
9SYH|1|a|A|2721
9SYH|1|a|G|2722

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain j

Large ribosomal subunit protein uL14

Chain m

Large ribosomal subunit protein bL17

Chain o

Large ribosomal subunit protein bL19