IL_9SYR_022

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9SYR|1|L1|U|467, 9SYR|1|L1|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|A|466
9SYR|1|L1|U|467
9SYR|1|L1|U|468
9SYR|1|L1|C|469
9SYR|1|L1|A|470
9SYR|1|L1|A|471
9SYR|1|L1|C|472
*
9SYR|1|L1|G|682
9SYR|1|L1|C|683
9SYR|1|L1|G|684
9SYR|1|L1|C|685
9SYR|1|L1|A|686
9SYR|1|L1|U|687
9SYR|1|L1|U|688
9SYR|1|L1|U|689

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LG

60S ribosomal protein L28

Chain Le

Large ribosomal subunit protein eL6