IL_9SYR_061

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GCGAA(PSU)*AAAC

Length

10 nucleotides

Bulged bases

9SYR|1|L1|G|1741

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|G|1739
9SYR|1|L1|C|1740
9SYR|1|L1|G|1741
9SYR|1|L1|A|1742
9SYR|1|L1|A|1743
9SYR|1|L1|PSU|1744
*
9SYR|1|L1|A|1786
9SYR|1|L1|A|1787
9SYR|1|L1|A|1788
9SYR|1|L1|C|1789

Current chains

Chain L1

28S rRNA

Nearby chains

Chain L2

5S ribosomal RNA; 5S rRNA

Chain LM

60S ribosomal protein L10

Chain Ld

60S ribosomal protein L5

Chain Lk

60S ribosomal protein L21