IL_9SYR_134

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CUCAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|4596
9SYR|1|L1|U|4597
9SYR|1|L1|C|4598
9SYR|1|L1|A|4599
9SYR|1|L1|G|4600
9SYR|1|L1|U|4601
9SYR|1|L1|A|4602
9SYR|1|L1|C|4603
*
9SYR|1|L1|G|4608
9SYR|1|L1|G|4609
9SYR|1|L1|A|4610
9SYR|1|L1|A|4611
9SYR|1|L1|C|4612
9SYR|1|L1|C|4613
9SYR|1|L1|G|4614

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LD

Ubiquitin-60S ribosomal protein L40

Chain LK

60S ribosomal protein L9

Chain Lb

60S ribosomal protein L3

Chain Lm

60S ribosomal protein L23