IL_9SYR_134
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_134 not in the Motif Atlas
- Homologous match to IL_8GLP_159
- Geometric discrepancy: 0.0878
- The information below is about IL_8GLP_159
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_34443.2
- Basepair signature
- cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
9SYR|1|L1|C|4596
9SYR|1|L1|U|4597
9SYR|1|L1|C|4598
9SYR|1|L1|A|4599
9SYR|1|L1|G|4600
9SYR|1|L1|U|4601
9SYR|1|L1|A|4602
9SYR|1|L1|C|4603
*
9SYR|1|L1|G|4608
9SYR|1|L1|G|4609
9SYR|1|L1|A|4610
9SYR|1|L1|A|4611
9SYR|1|L1|C|4612
9SYR|1|L1|C|4613
9SYR|1|L1|G|4614
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain LD
- Ubiquitin-60S ribosomal protein L40
- Chain LK
- 60S ribosomal protein L9
- Chain Lb
- 60S ribosomal protein L3
- Chain Lm
- 60S ribosomal protein L23
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