IL_9SYR_165

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GAUUAAG*CGC

Length

10 nucleotides

Bulged bases

9SYR|1|S1|U|44, 9SYR|1|S1|A|46

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|41
9SYR|1|S1|A|42
9SYR|1|S1|U|43
9SYR|1|S1|U|44
9SYR|1|S1|A|45
9SYR|1|S1|A|46
9SYR|1|S1|G|47
*
9SYR|1|S1|C|479
9SYR|1|S1|G|480
9SYR|1|S1|C|481

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Sg

Small ribosomal subunit protein uS12