IL_9SYR_173

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9SYR|1|S1|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|145
9SYR|1|S1|G|146
9SYR|1|S1|A|147
9SYR|1|S1|U|148
9SYR|1|S1|A|149
9SYR|1|S1|A|150
9SYR|1|S1|C|151
*
9SYR|1|S1|G|167
9SYR|1|S1|C|168
9SYR|1|S1|U|169
9SYR|1|S1|A|170
9SYR|1|S1|A|171
9SYR|1|S1|OMU|172
9SYR|1|S1|A|173
9SYR|1|S1|OMC|174

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Ln

60S ribosomal protein L24

Chain Sh

Isoform 3 of Small ribosomal subunit protein eS24

Chain Sy

40S ribosomal protein S6