IL_9SYR_193

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GUGCCAG*CGG(OMU)AAUUC

Length

16 nucleotides

Bulged bases

9SYR|1|S1|OMU|627, 9SYR|1|S1|A|628

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|611
9SYR|1|S1|U|612
9SYR|1|S1|G|613
9SYR|1|S1|C|614
9SYR|1|S1|C|615
9SYR|1|S1|A|616
9SYR|1|S1|G|617
*
9SYR|1|S1|C|624
9SYR|1|S1|G|625
9SYR|1|S1|G|626
9SYR|1|S1|OMU|627
9SYR|1|S1|A|628
9SYR|1|S1|A|629
9SYR|1|S1|U|630
9SYR|1|S1|U|631
9SYR|1|S1|C|632

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Sg

Small ribosomal subunit protein uS12

Chain Sn

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

Chain Sx

40S ribosomal protein S3