IL_9SYR_202

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GGCG*CCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9SYR_202 not in the Motif Atlas

Geometric match to IL_8CRE_417

Geometric discrepancy: 0.2941

The information below is about IL_8CRE_417

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77718.1

Basepair signature

cWW-L-cSW-cWW

Number of instances in this motif group

11

Unit IDs

9SYR|1|S1|G|751
9SYR|1|S1|G|752
9SYR|1|S1|C|753
9SYR|1|S1|G|754
*
9SYR|1|S1|C|790
9SYR|1|S1|C|791
9SYR|1|S1|C|792

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Sy

40S ribosomal protein S6