IL_9SYR_224

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CC(PSU)*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|C|1230
9SYR|1|S1|C|1231
9SYR|1|S1|PSU|1232
*
9SYR|1|S1|G|1526
9SYR|1|S1|C|1527
9SYR|1|S1|G|1528

Current chains

Chain S1

18S rRNA

Nearby chains

Chain S3

Transfer RNA; tRNA

Chain Sc

40S ribosomal protein S16

Chain Sd

Small ribosomal subunit protein uS13

Chain Si

Small ribosomal subunit protein eS19

Chain Sm

40S ribosomal protein S25