IL_9T0Y_169

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

9T0Y|1|a|U|2689, 9T0Y|1|a|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|a|U|2687
9T0Y|1|a|G|2688
9T0Y|1|a|U|2689
9T0Y|1|a|U|2690
9T0Y|1|a|C|2691
*
9T0Y|1|a|G|2718
9T0Y|1|a|G|2719
9T0Y|1|a|U|2720
9T0Y|1|a|A|2721
9T0Y|1|a|G|2722

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain j

Large ribosomal subunit protein uL14

Chain m

Large ribosomal subunit protein bL17

Chain o

Large ribosomal subunit protein bL19