IL_9T0Z_040
3D structure
- PDB id
- 9T0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- HPFcold Bound Hibernating C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T0Z_040 not in the Motif Atlas
- Homologous match to IL_6CZR_364
- Geometric discrepancy: 0.1369
- The information below is about IL_6CZR_364
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9T0Z|1|A|G|883
9T0Z|1|A|G|884
9T0Z|1|A|A|885
9T0Z|1|A|G|886
9T0Z|1|A|U|887
9T0Z|1|A|A|888
9T0Z|1|A|C|889
9T0Z|1|A|G|890
*
9T0Z|1|A|U|901
9T0Z|1|A|A|902
9T0Z|1|A|A|903
9T0Z|1|A|A|904
9T0Z|1|A|A|905
9T0Z|1|A|C|906
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain L
- Small ribosomal subunit protein uS12
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