IL_9T0Z_050
3D structure
- PDB id
- 9T0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- HPFcold Bound Hibernating C. burnetii 30S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 9T0Z|1|A|C|1197, 9T0Z|1|A|A|1198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T0Z_050 not in the Motif Atlas
- Homologous match to IL_6CZR_155
- Geometric discrepancy: 0.1802
- The information below is about IL_6CZR_155
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9T0Z|1|A|G|1053
9T0Z|1|A|G|1054
*
9T0Z|1|A|U|1196
9T0Z|1|A|C|1197
9T0Z|1|A|A|1198
9T0Z|1|A|U|1199
9T0Z|1|A|C|1200
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 9
- Ribosome hibernation promoting factor
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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