IL_9T4R_074
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUUAGUAG*CGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T4R_074 not in the Motif Atlas
- Homologous match to IL_7A0S_007
- Geometric discrepancy: 0.1089
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9T4R|1|a|C|241
9T4R|1|a|U|242
9T4R|1|a|U|243
9T4R|1|a|A|244
9T4R|1|a|G|245
9T4R|1|a|U|246
9T4R|1|a|A|247
9T4R|1|a|G|248
*
9T4R|1|a|C|256
9T4R|1|a|G|257
9T4R|1|a|A|258
9T4R|1|a|A|259
9T4R|1|a|A|260
9T4R|1|a|U|261
9T4R|1|a|G|262
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain k
- Large ribosomal subunit protein uL15
Coloring options: