IL_9TEY_034

3D structure

PDB id

9TEY (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the terminating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

9TEY|1|A|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TEY_034 not in the Motif Atlas

Geometric match to IL_8B0X_034

Geometric discrepancy: 0.0713

The information below is about IL_8B0X_034

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_71972.2

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

12

Unit IDs

9TEY|1|A|U|684
9TEY|1|A|G|685
9TEY|1|A|U|686
9TEY|1|A|A|687
9TEY|1|A|G|688
*
9TEY|1|A|C|699
9TEY|1|A|G|700
9TEY|1|A|U|701
9TEY|1|A|A|702
9TEY|1|A|G|703
9TEY|1|A|A|704
9TEY|1|A|G|705
9TEY|1|A|A|706

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11

Chain V

Large subunit ribosomal RNA; LSU rRNA