IL_9TI5_101
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 9TI5|1|A|U|2716, 9TI5|1|A|A|2717
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_101 not in the Motif Atlas
- Homologous match to IL_7A0S_096
- Geometric discrepancy: 0.1719
- The information below is about IL_7A0S_096
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9TI5|1|A|U|2714
9TI5|1|A|G|2715
9TI5|1|A|U|2716
9TI5|1|A|A|2717
9TI5|1|A|C|2718
*
9TI5|1|A|G|2745
9TI5|1|A|G|2746
9TI5|1|A|U|2747
9TI5|1|A|A|2748
9TI5|1|A|G|2749
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L19
Coloring options: