IL_9TI5_162
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GCAG*CAAAUC
- Length
- 10 nucleotides
- Bulged bases
- 9TI5|1|a|A|1267, 9TI5|1|a|A|1290, 9TI5|1|a|U|1291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_162 not in the Motif Atlas
- Homologous match to IL_6CZR_161
- Geometric discrepancy: 0.2948
- The information below is about IL_6CZR_161
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.1
- Basepair signature
- cWW-cSS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9TI5|1|a|G|1265
9TI5|1|a|C|1266
9TI5|1|a|A|1267
9TI5|1|a|G|1268
*
9TI5|1|a|C|1287
9TI5|1|a|A|1288
9TI5|1|a|A|1289
9TI5|1|a|A|1290
9TI5|1|a|U|1291
9TI5|1|a|C|1292
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S3
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: