IL_9TI6_143
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- AAGAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- 9TI6|1|a|A|673
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_143 not in the Motif Atlas
- Homologous match to IL_6CZR_141
- Geometric discrepancy: 0.1806
- The information below is about IL_6CZR_141
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9TI6|1|a|A|670
9TI6|1|a|A|671
9TI6|1|a|G|672
9TI6|1|a|A|673
9TI6|1|a|G|674
*
9TI6|1|a|U|748
9TI6|1|a|G|749
9TI6|1|a|G|750
9TI6|1|a|U|751
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S6
- Chain p
- 30S ribosomal protein S15
- Chain s
- 30S ribosomal protein S18
Coloring options: