IL_9TI9_169

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CGUC*GUCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI9_169 not in the Motif Atlas

Geometric match to IL_9H3G_166

Geometric discrepancy: 0.2449

The information below is about IL_9H3G_166

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37443.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

11

Unit IDs

9TI9|1|a|C|1414
9TI9|1|a|G|1415
9TI9|1|a|U|1416
9TI9|1|a|C|1417
*
9TI9|1|a|G|1505
9TI9|1|a|U|1506
9TI9|1|a|C|1507
9TI9|1|a|G|1508

Current chains

Chain a

16S rRNA

Nearby chains

Chain C

Ribosome-recycling factor

Chain m

30S ribosomal protein S12