3D structure

PDB id
9TKR (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S elongation competent complex (70S EC)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGCAAAC*GGACGUAUA
Length
16 nucleotides
Bulged bases
9TKR|1|D2|A|1801, 9TKR|1|D2|C|1816, 9TKR|1|D2|U|1820
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9TKR|1|D2|U|1798
9TKR|1|D2|G|1799
9TKR|1|D2|C|1800
9TKR|1|D2|A|1801
9TKR|1|D2|A|1802
9TKR|1|D2|A|1803
9TKR|1|D2|C|1804
*
9TKR|1|D2|G|1813
9TKR|1|D2|G|1814
9TKR|1|D2|A|1815
9TKR|1|D2|C|1816
9TKR|1|D2|G|1817
9TKR|1|D2|U|1818
9TKR|1|D2|A|1819
9TKR|1|D2|U|1820
9TKR|1|D2|A|1821

Current chains

Chain D2
23S Ribosomal RNA

Nearby chains

Chain BB
Large ribosomal subunit protein uL2
Chain D1
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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