IL_9TNL_115
3D structure
- PDB id
- 9TNL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with A/P- and P/E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- GAAG*CCUGC
- Length
- 9 nucleotides
- Bulged bases
- 9TNL|1|a|U|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TNL_115 not in the Motif Atlas
- Geometric match to IL_8B0X_115
- Geometric discrepancy: 0.0402
- The information below is about IL_8B0X_115
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60418.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
9TNL|1|a|G|1432
9TNL|1|a|A|1433
9TNL|1|a|A|1434
9TNL|1|a|G|1435
*
9TNL|1|a|C|1557
9TNL|1|a|C|1558
9TNL|1|a|U|1559
9TNL|1|a|G|1560
9TNL|1|a|C|1561
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: