IL_9TZ5_062
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9TZ5|1|a|G|1714
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ5_062 not in the Motif Atlas
- Homologous match to IL_7A0S_063
- Geometric discrepancy: 0.1
- The information below is about IL_7A0S_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
9TZ5|1|a|C|1701
9TZ5|1|a|G|1702
9TZ5|1|a|U|1703
9TZ5|1|a|A|1704
9TZ5|1|a|A|1705
9TZ5|1|a|C|1706
*
9TZ5|1|a|G|1711
9TZ5|1|a|G|1712
9TZ5|1|a|A|1713
9TZ5|1|a|G|1714
9TZ5|1|a|A|1715
9TZ5|1|a|A|1716
9TZ5|1|a|G|1717
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain o
- Large ribosomal subunit protein uL2
Coloring options: