IL_9UZM_052

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGA*UCUUUGG

Length

10 nucleotides

Bulged bases

9UZM|1|2|C|1149, 9UZM|1|2|U|1151, 9UZM|1|2|G|1153

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|C|1087
9UZM|1|2|G|1088
9UZM|1|2|A|1089
*
9UZM|1|2|U|1148
9UZM|1|2|C|1149
9UZM|1|2|U|1150
9UZM|1|2|U|1151
9UZM|1|2|U|1152
9UZM|1|2|G|1153
9UZM|1|2|G|1154

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

Small ribosomal subunit protein uS5

Chain P

Small ribosomal subunit protein uS15

Chain Y

Small ribosomal subunit protein uS8

Chain Z

Small ribosomal subunit protein uS12

Chain c

Small ribosomal subunit protein eS27