IL_9W0N_015
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 9W0N|1|1|G|801, 9W0N|1|1|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_015 not in the Motif Atlas
- Homologous match to IL_8B0X_080
- Geometric discrepancy: 0.1346
- The information below is about IL_8B0X_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.3
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
9W0N|1|1|G|674
9W0N|1|1|A|675
9W0N|1|1|A|676
9W0N|1|1|A|677
9W0N|1|1|C|678
*
9W0N|1|1|G|799
9W0N|1|1|A|800
9W0N|1|1|G|801
9W0N|1|1|A|802
9W0N|1|1|U|803
9W0N|1|1|A|804
9W0N|1|1|G|805
9W0N|1|1|C|806
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL4
- Chain l
- Large ribosomal subunit protein uL15
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