IL_9W0N_035
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 9W0N|1|1|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_035 not in the Motif Atlas
- Homologous match to IL_8B0X_100
- Geometric discrepancy: 0.16
- The information below is about IL_8B0X_100
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
9W0N|1|1|U|1018
9W0N|1|1|U|1019
9W0N|1|1|A|1020
9W0N|1|1|A|1021
9W0N|1|1|G|1022
9W0N|1|1|U|1023
9W0N|1|1|G|1024
*
9W0N|1|1|C|1140
9W0N|1|1|U|1141
9W0N|1|1|A|1142
9W0N|1|1|A|1143
9W0N|1|1|A|1144
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain F
- Large ribosomal subunit protein bL36A
- Chain j
- Large ribosomal subunit protein uL13
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