IL_9W0N_061
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 9W0N|1|1|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_061 not in the Motif Atlas
- Homologous match to IL_8B0X_127
- Geometric discrepancy: 0.1241
- The information below is about IL_8B0X_127
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.3
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
9W0N|1|1|C|1686
9W0N|1|1|G|1687
9W0N|1|1|U|1688
9W0N|1|1|A|1689
9W0N|1|1|A|1690
9W0N|1|1|C|1691
*
9W0N|1|1|G|1696
9W0N|1|1|G|1697
9W0N|1|1|A|1698
9W0N|1|1|G|1699
9W0N|1|1|A|1700
9W0N|1|1|A|1701
9W0N|1|1|G|1702
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- Large ribosomal subunit protein uL2
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