IL_9W0N_086
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_086 not in the Motif Atlas
- Homologous match to IL_8B0X_153
- Geometric discrepancy: 0.117
- The information below is about IL_8B0X_153
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9W0N|1|1|C|2466
9W0N|1|1|C|2467
9W0N|1|1|A|2468
9W0N|1|1|A|2469
9W0N|1|1|G|2470
*
9W0N|1|1|C|2480
9W0N|1|1|G|2481
9W0N|1|1|A|2482
9W0N|1|1|C|2483
9W0N|1|1|G|2484
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain F
- Large ribosomal subunit protein bL36A
- Chain m
- Large ribosomal subunit protein uL16
Coloring options: