IL_9W0N_118
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9W0N|1|3|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_118 not in the Motif Atlas
- Homologous match to IL_8B0X_012
- Geometric discrepancy: 0.1172
- The information below is about IL_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9W0N|1|3|G|147
9W0N|1|3|G|148
9W0N|1|3|A|149
9W0N|1|3|U|150
9W0N|1|3|A|151
9W0N|1|3|A|152
9W0N|1|3|C|153
*
9W0N|1|3|G|168
9W0N|1|3|C|169
9W0N|1|3|U|170
9W0N|1|3|A|171
9W0N|1|3|A|172
9W0N|1|3|U|173
9W0N|1|3|A|174
9W0N|1|3|C|175
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain Y
- Small ribosomal subunit protein bS20
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