IL_9WNQ_069
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WNQ_069 not in the Motif Atlas
- Homologous match to IL_7A0S_001
- Geometric discrepancy: 0.1239
- The information below is about IL_7A0S_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
9WNQ|1|b|G|24
9WNQ|1|b|U|25
9WNQ|1|b|G|26
9WNQ|1|b|G|27
9WNQ|1|b|A|28
9WNQ|1|b|U|29
9WNQ|1|b|G|30
*
9WNQ|1|b|C|510
9WNQ|1|b|U|511
9WNQ|1|b|G|512
9WNQ|1|b|A|513
9WNQ|1|b|A|514
9WNQ|1|b|A|515
9WNQ|1|b|C|516
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL32
- Chain r
- Large ribosomal subunit protein bL20
- Chain t
- 50S ribosomal protein L22
Coloring options: