IL_9WNQ_112
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- CUGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 9WNQ|1|b|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WNQ_112 not in the Motif Atlas
- Homologous match to IL_7A0S_043
- Geometric discrepancy: 0.1753
- The information below is about IL_7A0S_043
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
9WNQ|1|b|C|1208
9WNQ|1|b|U|1209
9WNQ|1|b|G|1210
9WNQ|1|b|C|1211
9WNQ|1|b|G|1212
9WNQ|1|b|A|1213
9WNQ|1|b|A|1214
9WNQ|1|b|G|1215
*
9WNQ|1|b|U|1234
9WNQ|1|b|G|1235
9WNQ|1|b|G|1236
9WNQ|1|b|A|1237
9WNQ|1|b|G|1238
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain r
- Large ribosomal subunit protein bL20
Coloring options: