IL_9WNQ_122

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

9WNQ|1|b|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9WNQ_122 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.1681

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9WNQ|1|b|C|1437
9WNQ|1|b|U|1438
9WNQ|1|b|A|1439
9WNQ|1|b|U|1440
*
9WNQ|1|b|A|1551
9WNQ|1|b|A|1552
9WNQ|1|b|A|1553
9WNQ|1|b|U|1554
9WNQ|1|b|G|1555

Current chains

Chain b

23S ribosomal RNA

Nearby chains