IL_9WW4_036
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GAAGGUGG*UGUUACAGC
- Length
- 17 nucleotides
- Bulged bases
- 9WW4|1|AA|G|748, 9WW4|1|AA|C|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW4_036 not in the Motif Atlas
- Homologous match to IL_8GLP_040
- Geometric discrepancy: 0.1051
- The information below is about IL_8GLP_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25001.3
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9WW4|1|AA|G|745
9WW4|1|AA|A|746
9WW4|1|AA|A|747
9WW4|1|AA|G|748
9WW4|1|AA|G|749
9WW4|1|AA|U|750
9WW4|1|AA|G|751
9WW4|1|AA|G|752
*
9WW4|1|AA|U|911
9WW4|1|AA|G|912
9WW4|1|AA|U|913
9WW4|1|AA|U|914
9WW4|1|AA|A|915
9WW4|1|AA|C|916
9WW4|1|AA|A|917
9WW4|1|AA|G|918
9WW4|1|AA|C|919
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AO
- 60S ribosomal protein L14
- Chain AU
- 60S ribosomal protein L18a
Coloring options: