IL_9WW5_003
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GAC*GCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_003 not in the Motif Atlas
- Homologous match to IL_8GLP_003
- Geometric discrepancy: 0.1068
- The information below is about IL_8GLP_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_19025.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
9WW5|1|AA|G|16
9WW5|1|AA|A|17
9WW5|1|AA|C|18
*
9WW5|1|AC|G|139
9WW5|1|AC|C|140
9WW5|1|AC|C|141
Current chains
- Chain AA
- 28S rRNA (3773-MER)
- Chain AC
- 5.8S rRNA (156-MER)
Nearby chains
- Chain AP
- 60S ribosomal protein L15
- Chain AZ
- 60S ribosomal protein L23a
- Chain Aj
- 60S ribosomal protein L35
- Chain Al
- 60S ribosomal protein L37
Coloring options: