IL_9WW5_190
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- (PSU)UUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 9WW5|1|BA|U|368, 9WW5|1|BA|C|369
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_190 not in the Motif Atlas
- Homologous match to IL_9PN5_160
- Geometric discrepancy: 0.2485
- The information below is about IL_9PN5_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01372.4
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
9WW5|1|BA|PSU|366
9WW5|1|BA|U|367
9WW5|1|BA|U|368
9WW5|1|BA|C|369
9WW5|1|BA|G|370
9WW5|1|BA|A|371
*
9WW5|1|BA|U|393
9WW5|1|BA|G|394
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- 40S ribosomal protein S8
- Chain BJ
- 40S ribosomal protein S11
Coloring options: