IL_9WW5_198
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GAG*CGAGG(A2M)UC
- Length
- 11 nucleotides
- Bulged bases
- 9WW5|1|BA|G|588, 9WW5|1|BA|G|589, 9WW5|1|BA|U|591
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_198 not in the Motif Atlas
- Homologous match to IL_9PN5_168
- Geometric discrepancy: 0.2878
- The information below is about IL_9PN5_168
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02511.3
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
9WW5|1|BA|G|563
9WW5|1|BA|A|564
9WW5|1|BA|G|565
*
9WW5|1|BA|C|585
9WW5|1|BA|G|586
9WW5|1|BA|A|587
9WW5|1|BA|G|588
9WW5|1|BA|G|589
9WW5|1|BA|A2M|590
9WW5|1|BA|U|591
9WW5|1|BA|C|592
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BX
- 40S ribosomal protein S9
- Chain Bf
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Coloring options: