IL_9WW5_217
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GUAU*AGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_217 not in the Motif Atlas
- Homologous match to IL_9PN5_186
- Geometric discrepancy: 0.1155
- The information below is about IL_9PN5_186
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9WW5|1|BA|G|942
9WW5|1|BA|U|943
9WW5|1|BA|A|944
9WW5|1|BA|U|945
*
9WW5|1|BA|A|981
9WW5|1|BA|G|982
9WW5|1|BA|A|983
9WW5|1|BA|C|984
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain AD
- 60S ribosomal protein L8
- Chain Ar
- 60S ribosomal protein L37a
- Chain BD
- 40S ribosomal protein S3a
- Chain Ba
- Small ribosomal subunit protein uS11
Coloring options: