IL_9XTC_042

3D structure

PDB id

9XTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class C, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9XTC_042 not in the Motif Atlas

Homologous match to IL_6CZR_157

Geometric discrepancy: 0.3796

The information below is about IL_6CZR_157

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_08069.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

9XTC|1|A|G|1061
9XTC|1|A|U|1062
9XTC|1|A|C|1063
*
9XTC|1|A|G|1193
9XTC|1|A|U|1194
9XTC|1|A|C|1195

Current chains

Chain A

RNA (1176-MER)

Nearby chains

Chain E

30S ribosomal protein S5