IL_9Y49_245

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

9Y49|1|B2|G|1285, 9Y49|1|B2|U|1314

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|1281
9Y49|1|B2|A|1282
9Y49|1|B2|C|1283
9Y49|1|B2|A|1284
9Y49|1|B2|G|1285
9Y49|1|B2|G|1286
9Y49|1|B2|A|1287
9Y49|1|B2|U|1288
9Y49|1|B2|U|1289
9Y49|1|B2|G|1290
*
9Y49|1|B2|C|1309
9Y49|1|B2|U|1310
9Y49|1|B2|C|1311
9Y49|1|B2|G|1312
9Y49|1|B2|A|1313
9Y49|1|B2|U|1314
9Y49|1|B2|U|1315
9Y49|1|B2|C|1316

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AK

40S ribosomal protein S10

Chain AM

40S ribosomal protein S12

Chain Ad

40S ribosomal protein S29

Chain Af

40S ribosomal protein S27a