IL_9Y4G_008

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

9Y4G|1|A5|G|119, 9Y4G|1|A5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|C|118
9Y4G|1|A5|G|119
9Y4G|1|A5|A|120
9Y4G|1|A5|A|121
9Y4G|1|A5|U|122
*
9Y4G|1|A5|A|147
9Y4G|1|A5|C|148
9Y4G|1|A5|A|149
9Y4G|1|A5|U|150
9Y4G|1|A5|G|151
9Y4G|1|A5|U|152
9Y4G|1|A5|G|153

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain A8

5.8S ribosomal RNA; 5.8S rRNA

Chain CG

60S ribosomal protein L7a

Chain CN

60S ribosomal protein L15

Chain Ch

60S ribosomal protein L35