IL_9Y4G_096

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGGAAUG*CGAGAGA

Length

14 nucleotides

Bulged bases

9Y4G|1|A6|U|2661, 9Y4G|1|A6|A|2674

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|U|2656
9Y4G|1|A6|G|2657
9Y4G|1|A6|G|2658
9Y4G|1|A6|A|2659
9Y4G|1|A6|A|2660
9Y4G|1|A6|U|2661
9Y4G|1|A6|G|2662
*
9Y4G|1|A6|C|2672
9Y4G|1|A6|G|2673
9Y4G|1|A6|A|2674
9Y4G|1|A6|G|2675
9Y4G|1|A6|A|2676
9Y4G|1|A6|G|2677
9Y4G|1|A6|A|2678

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain AN

40S ribosomal protein S13

Chain CR

60S ribosomal protein L19

Chain CZ

60S ribosomal protein L27

Chain Cg

60S ribosomal protein L34

Chain Cp

60S ribosomal protein L37a