IL_9Y4G_114

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

9Y4G|1|A6|A|3785, 9Y4G|1|A6|C|3791, 9Y4G|1|A6|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|C|3781
9Y4G|1|A6|C|3782
9Y4G|1|A6|A|3783
9Y4G|1|A6|A|3784
9Y4G|1|A6|A|3785
9Y4G|1|A6|U|3786
9Y4G|1|A6|G|3787
9Y4G|1|A6|C|3788
9Y4G|1|A6|C|3789
9Y4G|1|A6|U|3790
9Y4G|1|A6|C|3791
9Y4G|1|A6|G|3792
*
9Y4G|1|A6|C|3808
9Y4G|1|A6|G|3809
9Y4G|1|A6|C|3810
9Y4G|1|A6|G|3811

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain B2

Small subunit ribosomal RNA; SSU rRNA

Chain Bb

Transfer RNA; tRNA

Chain Cn

60S ribosomal protein L41