IL_9Y4G_188

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9Y4G|1|B2|U|361, 9Y4G|1|B2|C|399, 9Y4G|1|B2|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|U|359
9Y4G|1|B2|A|360
9Y4G|1|B2|U|361
9Y4G|1|B2|C|362
9Y4G|1|B2|A|363
9Y4G|1|B2|A|364
*
9Y4G|1|B2|U|396
9Y4G|1|B2|G|397
9Y4G|1|B2|A|398
9Y4G|1|B2|C|399
9Y4G|1|B2|C|400
9Y4G|1|B2|A|401
9Y4G|1|B2|C|402
9Y4G|1|B2|G|403

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AI

40S ribosomal protein S8

Chain AL

40S ribosomal protein S11

Chain AX

40S ribosomal protein S23